Slead: low-memory, steady distributed systems slicing

Slicing a large-scale distributed system is the process of autonomously partitioning its nodes into k groups, named slices. Slicing is associated to an order on node-specific criteria, such as available storage, uptime, or bandwidth. Each slice corresponds to the nodes between two quantiles in a virtual ranking according to the criteria. For instance, a system can be split in three groups, one with nodes with the lowest uptimes, one with nodes with the highest uptimes, and one in the middle. Such a partitioning can be used by applications to assign different tasks to different groups of nodes, e.g., assigning critical tasks to the more powerful or stable nodes and less critical tasks to other slices. Assigning a slice to each node in a large-scale distributed system, where no global knowledge of nodes’ criteria exists, is not trivial. Recently, much research effort was dedicated to guaranteeing a fast and correct convergence in comparison to a global sort of the nodes. Unfortunately, state-of-the-art slicing protocols exhibit flaws that preclude their application in real scenarios, in particular with respect to cost and stability. In this paper, we identify steadiness issues where nodes in a slice border constantly exchange slice and large memory requirements for adequate convergence, and provide practical solutions for the two. Our solutions are generic and can be applied to two different state-of-the-art slicing protocols with little effort and while preserving the desirable properties of each. The effectiveness of the proposed solutions is extensively studied in several simulated experiments.(undefined

MeT: workload aware elasticity for NoSQL

NoSQL databases manage the bulk of data produced by modern Web applications such as social networks. This stems from their ability to partition and spread data to all available nodes, allowing NoSQL systems to scale. Unfortunately, current solutions' scale out is oblivious to the underlying data access patterns, resulting in both highly skewed load across nodes and suboptimal node configurations. In this paper, we first show that judicious placement of HBase partitions taking into account data access patterns can improve overall throughput by 35%. Next, we go beyond current state of the art elastic systems limited to uninformed replica addition and removal by: i) reconfiguring existing replicas according to access patterns and ii) adding replicas specifically configured to the expected access pattern. MeT is a prototype for a Cloud-enabled framework that can be used alone or in conjunction with OpenStack for the automatic and heterogeneous reconfiguration of a HBase deployment. Our evaluation, conducted using the YCSB workload generator and a TPC-C workload, shows that MeT is able to i) autonomously achieve the performance of a manual configured cluster and ii) quickly reconfigure the cluster according to unpredicted workload changes.(undefined

The cyclooxigenase-2 inhibitor parecoxib prevents epidermal dysplasia in HPV16-transgenic mice: efficacy and safety observations

Carcinogenesis induced by high-risk human papillomavirus (HPV) involves inflammatory phenomena, partially mediated by cyclooxigenase-2. In pre-clinical models of HPV-induced cancer, cyclooxygenase-2 inhibitors have shown significant e cacy, but also considerable toxicity. This study addresses the chemopreventive e ect and hepatic toxicity of a specific cyclooxigensase-2 inhibitor, parecoxib, in HPV16-transgenic mice. Forty-three 20 weeks-old female mice were divided into four groups: I (HPV16+/-, n = 10, parecoxib-treated); II (HPV16+/- n = 11, untreated); III (HPV16+/-, n = 11, parecoxib-treated) and IV (HPV16+/- n = 11, untreated). Parecoxib (5.0 mg/kg once daily) or vehicle was administered intraperitoneally for 22 consecutive days. Skin lesions were classified histologically. Toxicological endpoints included genotoxic parameters, hepatic oxidative stress, transaminases and histology. Parecoxib completely prevented the onset of epidermal dysplasia in HPV16+/- treated animals (0% versus 64% in HPV16+/- untreated, p = 0.027). Parecoxib decreases lipid peroxidation (LPO) and superoxide dismutase (SOD) activity and increases the GSH:GSSG ratio in HPV16+/- treated animals meaning that oxidative stress is lower. Parecoxib increased genotoxic stress parameters in wild-type and HPV16-transgenic mice, but didn’t modify histological or biochemical hepatic parameters. These results indicate that parecoxib has chemopreventive e ects against HPV16-induced lesions while maintaining an acceptable toxicological profile in this model.This work is supported by National Funds by FCT—Portuguese Foundation for Science and Technology, under the projects UID/AGR/04033/2019, UID/CVT/00772/2019 and UID/EQU/00511/2019 - Laboratory for Process Engineering, Environment, Biotechnology and Energy—LEPABE funded by national funds through FCT/MCTES (PIDDAC); Project “LEPABE-2-ECO-INNOVATION”—NORTE-01-0145-FEDER-000005, funded by Norte Portugal Regional Operational Programme (NORTE 2020), under PORTUGAL 2020 Partnership Agreement, through the European Regional Development Fund.info:eu-repo/semantics/publishedVersio

Nutrient Content with Different Fertilizer Management and Influence on Yield and Fruit Quality in Apple cv. Gala

Assessing a plant’s nutritional status and fertilizer rates and types that can optimize fruit quality and yield are critical in intensive apple orchards. The aim of this work was to identify correlations between nutrients in the different organs that allow the early diagnosis of the nutritional status and to assess the impact on the optimal nutrient content in apple leaves, as well as in the yield and quality of chemical and organic fertilization. Five orchards of ‘Gala’ were fertilized with different levels of NPK over a period of four years. Macro and micronutrients of buds, flowers, 45 and 90–110 days after full bloom (DAFB) leaves and 60 DAFB and 15 days before harvest (DBH) fruits were determined. Boron was the only element for which strong correlations, 0.7 < r < 0.9, were observed between all organ pairs. The fertilization treatments did not affect the nutrient concentrations in the leaves of 90–110 DAFB other than P, Ca and Mg and did not affect the macronutrients in the fruit. In one of the five orchards, the yield increased by 26% with double fertilization compared to standard fertilization and, for the other four orchards, the impact depended on the year. Fruit size was more related to crop load than to fertilization and TSS and firmness were not affected by the type or amount of fertilizers. Replacing part of the chemical fertilizer with organic materials did not affect productivity or fruit qualityinfo:eu-repo/semantics/publishedVersio

Data from Portuguese centers

© 2022 Sociedade Portuguesa de Cardiologia. Published by Elsevier España, S.L.U.INTRODUCTION: During the Covid-19 pandemic there has been a general belief that hospital admissions for non-infectious causes, especially cardiovascular disease, have fallen. OBJECTIVES: To assess the impact of the pandemic on admissions for ST-elevation myocardial infarction (STEMI) during the first pandemic wave. METHODS: We performed a multicenter retrospective analysis of consecutive patients presenting with STEMI in two Portuguese hospital centers in two sequential periods - P1 (March 1 to April 30) and P2 (May 1 to June 30). Patients' clinical data and hospital outcomes were compared between the two periods for the years 2017 to 2019 and for 2020. RESULTS: During P1 in 2020, a reduction in the number of STEMI patients was observed in comparison with previous years (26.0±4.2 vs. 16.5±4.9 cases per month; p=0.033), as well as an increase in the number of mechanical complications (0.0% vs. 3.0%; p=0.029). Percutaneous coronary interventions in the setting of failed thrombolysis were more frequent (1.9% vs. 9.1%; p=0.033). An overall trend for longer delays in key timings of STEMI care bundles was noted. Mortality was higher during P1 compared to previous years (1.9% vs. 12.1%; p=0.005). CONCLUSIONS: During the first Covid-19 wave fewer patients presented with STEMI at the catheterization laboratory for percutaneous coronary intervention. These patients presented more mechanical complications and higher mortality.proofepub_ahead_of_prin

Anatomy Teaching at the School of Health Sciences of University of Minho

info:eu-repo/semantics/publishedVersio

Neurodifferentiation and neuroprotection potential of mesenchymal stromal cell-derived secretome produced in different dynamic systems

Parkinson’s disease (PD) is the second most common neurodegenerative disorder and is characterized by the degeneration of the dopamine (DA) neurons in the substantia nigra pars compacta, leading to a loss of DA in the basal ganglia. The presence of aggregates of alpha-synuclein (α-synuclein) is seen as the main contributor to the pathogenesis and progression of PD. Evidence suggests that the secretome of mesenchymal stromal cells (MSC) could be a potential cell-free therapy for PD. However, to accelerate the integration of this therapy in the clinical setting, there is still the need to develop a protocol for the large-scale production of secretome under good manufacturing practices (GMP) guidelines. Bioreactors have the capacity to produce large quantities of secretomes in a scalable manner, surpassing the limitations of planar static culture systems. However, few studies focused on the influence of the culture system used to expand MSC, on the secretome composition. In this work, we studied the capacity of the secretome produced by bone marrow-derived mesenchymal stromal cells (BMSC) expanded in a spinner flask (SP) and in a Vertical-Wheel™ bioreactor (VWBR) system, to induce neurodifferentiation of human neural progenitor cells (hNPCs) and to prevent dopaminergic neuron degeneration caused by the overexpression of α-synuclein in one Caenorhabditis elegans model of PD. Results showed that secretomes from both systems were able to induce neurodifferentiation, though the secretome produced in the SP system had a greater effect. Additionally, in the conditions of our study, only the secretome produced in SP had a neuroprotective potential. Lastly, the secretomes had different profiles regarding the presence and/or specific intensity of different molecules, namely, interleukin (IL)-6, IL-4, matrix metalloproteinase-2 (MMP2), and 3 (MMP3), tumor necrosis factor-beta (TNF-β), osteopontin, nerve growth factor beta (NGFβ), granulocyte colony-stimulating factor (GCSF), heparin-binding (HB) epithelial growth factor (EGF)-like growth factor (HB-EGF), and IL-13. Overall, our results suggest that the culture conditions might have influenced the secretory profiles of cultured cells and, consequently, the observed effects. Additional studies should further explore the effects that different culture systems have on the secretome potential of PD.This work has been funded by la Caixa Foundation and Portuguese Foundation for Science and Technology (FCT) under the agreement LCF/PR/HP20/52300001; ICVS Scientific Microscopy Platform, member of the national infrastructure PPBI—Portuguese Platform of Bioimaging (PPBI-POCI-01-0145-FEDER-022122); by National funds, through the Foundation for Science and Technology (FCT)—project UIDB/50026/2020 and UIDP/50026/2020. CRM was supported by a Ph.D. scholarship from FCT and the company Stemmatters, Biotecnologia e Medicina Regenerativa SA (PD/BDE/127833/2016). Funding received by iBB-Institute for Bioengineering and Biosciences from FCT (UID/BIO/04565/2020) and through the project PTDC/EQU-EQU/31651/2017 is acknowledged. MAF was supported by a Ph.D. scholarship from FCT (SFRH/PD/BD/128328/2017). RC was supported by the EXOpro project (PTDC/EQU-QUE/31651/2017). JPS was supported by a Ph.D. scholarship from FCT and the company Bn’ML—Behavioral & Molecular Lab (PD/BDE/127834/2016). DS was supported by a Ph.D. scholarship from FCT and the company Stemmatters, Biotecnologia e Medicina Regenerativa S.A. (PD/BDE/135567/2018) JC was supported by a Ph.D. scholarship from FCT (SFRH/BD/5813/2020)

A practical clinical score

Copyright © 2022 Sociedade Portuguesa de Cardiologia. Publicado por Elsevier España, S.L.U. All rights reserved.INTRODUCTION AND OBJECTIVES: Obstructive coronary artery disease (CAD) remains the most common etiology of heart failure with reduced ejection fraction (HFrEF). However, there is controversy whether invasive coronary angiography (ICA) should be used initially to exclude CAD in patients presenting with new-onset HFrEF of unknown etiology. Our study aimed to develop a clinical score to quantify the risk of obstructive CAD in these patients. METHODS: We performed a cross-sectional observational study of 452 consecutive patients presenting with new-onset HFrEF of unknown etiology undergoing elective ICA in one academic center, between January 2005 and December 2019. Independent predictors for obstructive CAD were identified. A risk score was developed using multivariate logistic regression of designated variables. The accuracy and discriminative power of the predictive model were assessed. RESULTS: A total of 109 patients (24.1%) presented obstructive CAD. Six independent predictors were identified and included in the score: male gender (2 points), diabetes (1 point), dyslipidemia (1 point), smoking (1 point), peripheral arterial disease (1 point), and regional wall motion abnormalities (3 points). Patients with a score ≤3 had less than 15% predicted probability of obstructive CAD. Our score showed good discriminative power (C-statistic 0.872; 95% CI 0.834-0.909: p<0.001) and calibration (p=0.333 from the goodness-of-fit test). CONCLUSIONS: A simple clinical score showed the ability to predict the risk of obstructive CAD in patients presenting with new-onset HFrEF of unknown etiology and may guide the clinician in selecting the most appropriate diagnostic modality for the assessment of obstructive CAD.proofepub_ahead_of_prin

A importância das políticas de base territorial para evitar os cenários de risco de má nutrição em maiores de 64 anos em Vila Nova de Gaia - estudo de caso nas três freguesias de Valadares, Vilar do Paraíso e Madalena

No âmbito do projeto PRONUTRISENIOR (EEA Grant-81NU5) procurou-se desenvolver um índice de risco geonutricional para maiores de 64 anos residentes em Vila Nova de Gaia (VNG) nas freguesias de Valadares, Vilar do Paraíso e Madalena. Para este trabalho foi realizada uma avaliação do território de intervenção da Unidade de Saúde Familiar Nova Via (USF-NV), com o intuito de identificar as principais determinantes geográficas que possam explicar os resultados da avaliação nutricional de uma amostra de 602 utentes da USF-NV maiores de 64 anos (19,6% do universo de utentes maiores de 64 anos). A análise cruzada das características biogeofísicas e socioeconómicas das 3 freguesias, da localização dos fornecedores de alimentos (185) e dos diversos fornecedores de apoio social aos idosos (18), conduziu à identificação preliminar de algumas das variáveis-chave para a caracterização da vulnerabilidade social, económica e ambiental e posteriormente, com suporte na análise hierárquica de processos, caracterizar o risco geonutricional para os idosos destas freguesias. Os resultados preliminares mostram a importância de contemplar no ordenamento territorial o potencial multifinalitário de cada decisão e a necessidade de convocar para a reflexão as especificidades de cada combinação people & place nas suas múltiplas dimensões, se o objetivo for a promoção de contextos saudáveis de vida